Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC026320.2-201ENST00000434379 478 ntBASIC19.58■□□□□ 0.73
LTN1O94822 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.58■□□□□ 0.73
LTN1O94822 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
LTN1O94822 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LTN1O94822 AC025271.4-201ENST00000621477 1726 ntBASIC19.58■□□□□ 0.73
LTN1O94822 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.58■□□□□ 0.72
LTN1O94822 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.58■□□□□ 0.72
LTN1O94822 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LTN1O94822 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.58■□□□□ 0.72
LTN1O94822 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.58■□□□□ 0.72
LTN1O94822 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LTN1O94822 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.58■□□□□ 0.72
LTN1O94822 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LTN1O94822 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LTN1O94822 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LTN1O94822 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LTN1O94822 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LTN1O94822 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LTN1O94822 MRPL37P1-201ENST00000592451 1337 ntBASIC19.57■□□□□ 0.72
LTN1O94822 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.57■□□□□ 0.72
LTN1O94822 PTK2-225ENST00000520892 571 ntTSL 4 BASIC19.57■□□□□ 0.72
LTN1O94822 AC003686.1-201ENST00000550956 1034 ntBASIC19.57■□□□□ 0.72
LTN1O94822 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.57■□□□□ 0.72
LTN1O94822 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 AL031713.1-201ENST00000564813 661 ntBASIC19.57■□□□□ 0.72
LTN1O94822 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.57■□□□□ 0.72
LTN1O94822 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LTN1O94822 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 AL136172.1-201ENST00000598590 1394 ntBASIC19.57■□□□□ 0.72
LTN1O94822 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 BANF1P3-201ENST00000412556 261 ntBASIC19.57■□□□□ 0.72
LTN1O94822 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.57■□□□□ 0.72
LTN1O94822 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 RN7SL277P-201ENST00000481521 288 ntBASIC19.57■□□□□ 0.72
LTN1O94822 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.57■□□□□ 0.72
LTN1O94822 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.57■□□□□ 0.72
LTN1O94822 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 MIR4649-201ENST00000582839 64 ntBASIC19.57■□□□□ 0.72
LTN1O94822 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LTN1O94822 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LTN1O94822 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
LTN1O94822 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LTN1O94822 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.56■□□□□ 0.72
LTN1O94822 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 AC139712.1-201ENST00000378256 1875 ntBASIC19.56■□□□□ 0.72
LTN1O94822 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LTN1O94822 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.56■□□□□ 0.72
LTN1O94822 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LTN1O94822 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 AL512306.1-201ENST00000432698 848 ntBASIC19.56■□□□□ 0.72
LTN1O94822 AC114501.1-201ENST00000445949 172 ntBASIC19.56■□□□□ 0.72
LTN1O94822 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.56■□□□□ 0.72
LTN1O94822 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.56■□□□□ 0.72
LTN1O94822 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.56■□□□□ 0.72
LTN1O94822 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LTN1O94822 DNM1P30-201ENST00000563586 452 ntBASIC19.56■□□□□ 0.72
LTN1O94822 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
LTN1O94822 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LTN1O94822 MARK2P16-201ENST00000605714 1723 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms