Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.98□□□□□ -0.17
LRFN1Q9P244 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 CICP11-201ENST00000434745 2827 ntBASIC13.97□□□□□ -0.17
LRFN1Q9P244 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.97□□□□□ -0.17
LRFN1Q9P244 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AL606495.2-201ENST00000605867 535 ntBASIC13.97□□□□□ -0.17
LRFN1Q9P244 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 MIR6869-201ENST00000619434 62 ntBASIC13.97□□□□□ -0.17
LRFN1Q9P244 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
LRFN1Q9P244 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRFN1Q9P244 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRFN1Q9P244 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 AC091271.1-201ENST00000611877 1162 ntBASIC13.96□□□□□ -0.17
LRFN1Q9P244 AL603764.1-201ENST00000636452 321 ntBASIC13.96□□□□□ -0.17
LRFN1Q9P244 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRFN1Q9P244 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRFN1Q9P244 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.96□□□□□ -0.18
LRFN1Q9P244 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRFN1Q9P244 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRFN1Q9P244 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRFN1Q9P244 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms