Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.02■□□□□ 0.16
SCN4BQ8IWT1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCN4BQ8IWT1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 RPL13AP20-201ENST00000459725 609 ntBASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 RN7SL560P-201ENST00000577943 264 ntBASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 MIR4741-201ENST00000579822 90 ntBASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 AL137783.1-201ENST00000623494 1896 ntBASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 MYO15B-237ENST00000642007 4893 ntBASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCN4BQ8IWT1 KRT8P44-201ENST00000441609 1350 ntBASIC16■□□□□ 0.15
SCN4BQ8IWT1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 TUBB1P2-201ENST00000422712 1306 ntBASIC16■□□□□ 0.15
SCN4BQ8IWT1 TUBB1P1-201ENST00000503144 1300 ntBASIC16■□□□□ 0.15
SCN4BQ8IWT1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCN4BQ8IWT1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 CD8B2-202ENST00000417670 633 ntBASIC16■□□□□ 0.15
SCN4BQ8IWT1 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 FAM8A4P-201ENST00000435433 1213 ntBASIC16■□□□□ 0.15
SCN4BQ8IWT1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16■□□□□ 0.15
SCN4BQ8IWT1 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms