Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AC008267.1-201ENST00000474858 1069 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AC022217.1-201ENST00000521069 738 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AC136621.1-201ENST00000624017 2304 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 Z97180.1-201ENST00000445173 988 ntBASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 EEF1DP6-201ENST00000449232 372 ntBASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AC024681.1-201ENST00000521917 487 ntBASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AL133499.1-201ENST00000596207 608 ntBASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ENPP7P14-201ENST00000621765 1040 ntBASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 CICP24-201ENST00000605464 2705 ntBASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTC1Q2NKJ3 AC023908.3-201ENST00000564211 3047 ntBASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 FER1L4-210ENST00000615531 5998 ntBASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 RN7SL11P-201ENST00000471305 293 ntBASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms