Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.02□□□□□ -0.01
CDKL1Q00532 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL1Q00532 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDKL1Q00532 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL1Q00532 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDKL1Q00532 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.01□□□□□ -0.01
CDKL1Q00532 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL1Q00532 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 AC004066.1-201ENST00000502488 802 ntBASIC15.01□□□□□ -0.01
CDKL1Q00532 DOC2GP-202ENST00000514950 1163 ntBASIC15.01□□□□□ -0.01
CDKL1Q00532 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL1Q00532 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.01□□□□□ -0.01
CDKL1Q00532 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.01□□□□□ -0.01
CDKL1Q00532 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
CDKL1Q00532 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
CDKL1Q00532 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDKL1Q00532 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.01□□□□□ -0.01
CDKL1Q00532 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDKL1Q00532 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.01□□□□□ -0.01
CDKL1Q00532 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDKL1Q00532 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDKL1Q00532 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15□□□□□ -0.01
CDKL1Q00532 RN7SL399P-201ENST00000471648 279 ntBASIC15□□□□□ -0.01
CDKL1Q00532 FAM86LP-201ENST00000478302 853 ntBASIC15□□□□□ -0.01
CDKL1Q00532 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15□□□□□ -0.01
CDKL1Q00532 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15□□□□□ -0.01
CDKL1Q00532 TPRX2P-201ENST00000535362 881 ntBASIC15□□□□□ -0.01
CDKL1Q00532 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15□□□□□ -0.01
CDKL1Q00532 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 AC004790.1-201ENST00000612686 536 ntBASIC15□□□□□ -0.01
CDKL1Q00532 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CDKL1Q00532 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
CDKL1Q00532 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
CDKL1Q00532 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 ACE3P-201ENST00000423435 1973 ntBASIC15□□□□□ -0.01
CDKL1Q00532 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15□□□□□ -0.01
CDKL1Q00532 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms