Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.76■□□□□ 0.43
IRX3P78415 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
IRX3P78415 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IRX3P78415 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IRX3P78415 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IRX3P78415 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 AC022188.1-201ENST00000620960 1664 ntBASIC17.75■□□□□ 0.43
IRX3P78415 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX3P78415 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.75■□□□□ 0.43
IRX3P78415 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.75■□□□□ 0.43
IRX3P78415 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX3P78415 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IRX3P78415 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.75■□□□□ 0.43
IRX3P78415 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.75■□□□□ 0.43
IRX3P78415 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.75■□□□□ 0.43
IRX3P78415 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IRX3P78415 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
IRX3P78415 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 AC007787.1-201ENST00000588095 1583 ntBASIC17.74■□□□□ 0.43
IRX3P78415 MTHFR-217ENST00000641820 1569 ntBASIC17.74■□□□□ 0.43
IRX3P78415 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 KRT8P14-201ENST00000414254 1442 ntBASIC17.74■□□□□ 0.43
IRX3P78415 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 AL158070.2-201ENST00000623713 1621 ntBASIC17.74■□□□□ 0.43
IRX3P78415 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.74■□□□□ 0.43
IRX3P78415 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 HIST2H2BC-201ENST00000498492 580 ntBASIC17.74■□□□□ 0.43
IRX3P78415 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 COX5BP1-201ENST00000507622 393 ntBASIC17.74■□□□□ 0.43
IRX3P78415 AC126915.1-201ENST00000522847 1038 ntBASIC17.74■□□□□ 0.43
IRX3P78415 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.74■□□□□ 0.43
IRX3P78415 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.74■□□□□ 0.43
IRX3P78415 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
IRX3P78415 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 AC244157.2-201ENST00000616239 1006 ntBASIC17.74■□□□□ 0.43
IRX3P78415 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
IRX3P78415 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IRX3P78415 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
IRX3P78415 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IRX3P78415 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.73■□□□□ 0.43
IRX3P78415 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
IRX3P78415 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.73■□□□□ 0.43
IRX3P78415 AC068587.6-202ENST00000641839 5619 ntBASIC17.73■□□□□ 0.43
IRX3P78415 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IRX3P78415 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms