Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.05■□□□□ -0
SRP54P61011 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SRP54P61011 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SRP54P61011 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SRP54P61011 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.05■□□□□ -0
SRP54P61011 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SRP54P61011 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SRP54P61011 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SRP54P61011 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.04■□□□□ -0
SRP54P61011 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SRP54P61011 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.04■□□□□ -0
SRP54P61011 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.04■□□□□ -0
SRP54P61011 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.04■□□□□ -0
SRP54P61011 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.04■□□□□ -0
SRP54P61011 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.04■□□□□ -0
SRP54P61011 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SRP54P61011 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SRP54P61011 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SRP54P61011 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.04■□□□□ -0
SRP54P61011 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.04■□□□□ -0
SRP54P61011 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SRP54P61011 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.04■□□□□ -0
SRP54P61011 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.04■□□□□ -0
SRP54P61011 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.04■□□□□ -0
SRP54P61011 RN7SL48P-201ENST00000579283 293 ntBASIC15.04■□□□□ -0
SRP54P61011 MIR4538-201ENST00000581377 78 ntBASIC15.04■□□□□ -0
SRP54P61011 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.04■□□□□ -0
SRP54P61011 AC009542.2-202ENST00000619004 1067 ntBASIC15.04■□□□□ -0
SRP54P61011 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.04■□□□□ -0
SRP54P61011 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SRP54P61011 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.04■□□□□ -0
SRP54P61011 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.04■□□□□ -0
SRP54P61011 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SRP54P61011 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP54P61011 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.04■□□□□ -0
SRP54P61011 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.03■□□□□ -0
SRP54P61011 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SRP54P61011 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
SRP54P61011 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.03■□□□□ -0
SRP54P61011 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.03■□□□□ -0
SRP54P61011 MIR1202-201ENST00000408529 83 ntBASIC15.03■□□□□ -0
SRP54P61011 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 CD8B2-202ENST00000417670 633 ntBASIC15.03■□□□□ -0
SRP54P61011 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.03■□□□□ -0
SRP54P61011 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.03■□□□□ -0
SRP54P61011 RN7SL560P-201ENST00000577943 264 ntBASIC15.03■□□□□ -0
SRP54P61011 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.03■□□□□ -0
SRP54P61011 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.03■□□□□ -0
SRP54P61011 ECM1P1-201ENST00000604092 1279 ntBASIC15.03■□□□□ -0
SRP54P61011 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.03■□□□□ -0
SRP54P61011 AC006453.4-201ENST00000636949 1252 ntBASIC15.03■□□□□ -0
SRP54P61011 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
SRP54P61011 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.03■□□□□ -0
SRP54P61011 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP54P61011 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms