Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RHBDL3P58872 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.74■□□□□ 0.43
RHBDL3P58872 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RHBDL3P58872 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RHBDL3P58872 AL008718.2-201ENST00000609206 1313 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDL3P58872 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDL3P58872 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RHBDL3P58872 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDL3P58872 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 AC011742.3-201ENST00000439053 820 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.73■□□□□ 0.43
RHBDL3P58872 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RHBDL3P58872 CICP12-201ENST00000455801 843 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 RN7SL11P-201ENST00000471305 293 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 AC125604.1-201ENST00000496255 707 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.73■□□□□ 0.43
RHBDL3P58872 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.73■□□□□ 0.43
RHBDL3P58872 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.73■□□□□ 0.43
RHBDL3P58872 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.73■□□□□ 0.43
RHBDL3P58872 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDL3P58872 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDL3P58872 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RHBDL3P58872 AF254983.2-201ENST00000612331 135 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 FAM90A7P-201ENST00000382628 1395 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 FAM90A23P-201ENST00000400136 1395 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RHBDL3P58872 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDL3P58872 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 ACE3P-201ENST00000423435 1973 ntBASIC17.73■□□□□ 0.43
RHBDL3P58872 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.73■□□□□ 0.43
RHBDL3P58872 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.73■□□□□ 0.43
RHBDL3P58872 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RHBDL3P58872 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDL3P58872 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RHBDL3P58872 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 KRT8P19-201ENST00000551916 1455 ntBASIC17.72■□□□□ 0.43
RHBDL3P58872 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RHBDL3P58872 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 AC012441.2-201ENST00000444843 739 ntBASIC17.72■□□□□ 0.43
RHBDL3P58872 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.72■□□□□ 0.43
RHBDL3P58872 RN7SL769P-201ENST00000469386 295 ntBASIC17.72■□□□□ 0.43
RHBDL3P58872 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.72■□□□□ 0.43
RHBDL3P58872 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDL3P58872 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 AL132994.2-201ENST00000603120 687 ntBASIC17.72■□□□□ 0.43
RHBDL3P58872 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 AL805961.1-203ENST00000641078 1258 ntBASIC17.72■□□□□ 0.43
RHBDL3P58872 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RHBDL3P58872 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDL3P58872 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.72■□□□□ 0.43
RHBDL3P58872 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RHBDL3P58872 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.72■□□□□ 0.43
RHBDL3P58872 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.71■□□□□ 0.43
RHBDL3P58872 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 AL109954.1-202ENST00000564051 2148 ntBASIC17.71■□□□□ 0.43
RHBDL3P58872 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.71■□□□□ 0.43
RHBDL3P58872 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.71■□□□□ 0.43
RHBDL3P58872 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.71■□□□□ 0.43
RHBDL3P58872 AC091951.1-201ENST00000512854 2465 ntBASIC17.71■□□□□ 0.43
RHBDL3P58872 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RHBDL3P58872 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.71■□□□□ 0.43
RHBDL3P58872 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms