Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 DBET-201ENST00000630918 3363 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCKAP1LP55160 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
NCKAP1LP55160 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCKAP1LP55160 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.58■□□□□ 0.25
NCKAP1LP55160 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NCKAP1LP55160 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
NCKAP1LP55160 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCKAP1LP55160 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 AC006001.1-201ENST00000325130 474 ntBASIC16.58■□□□□ 0.24
NCKAP1LP55160 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 CD8B2-202ENST00000417670 633 ntBASIC16.58■□□□□ 0.24
NCKAP1LP55160 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 AC119751.2-201ENST00000504529 210 ntBASIC16.58■□□□□ 0.24
NCKAP1LP55160 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.58■□□□□ 0.24
NCKAP1LP55160 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCKAP1LP55160 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.57■□□□□ 0.24
NCKAP1LP55160 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NCKAP1LP55160 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms