Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.72■□□□□ 0.27
PMS1P54277 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.72■□□□□ 0.27
PMS1P54277 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 SERBP1P5-201ENST00000510079 1181 ntBASIC16.72■□□□□ 0.27
PMS1P54277 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.72■□□□□ 0.27
PMS1P54277 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.72■□□□□ 0.27
PMS1P54277 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.72■□□□□ 0.27
PMS1P54277 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.72■□□□□ 0.27
PMS1P54277 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.72■□□□□ 0.27
PMS1P54277 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
PMS1P54277 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.72■□□□□ 0.27
PMS1P54277 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 INTS4P2-202ENST00000614726 2019 ntBASIC16.72■□□□□ 0.27
PMS1P54277 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PMS1P54277 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PMS1P54277 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PMS1P54277 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PMS1P54277 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 KRT8P14-201ENST00000414254 1442 ntBASIC16.71■□□□□ 0.27
PMS1P54277 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PMS1P54277 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.71■□□□□ 0.27
PMS1P54277 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PMS1P54277 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.71■□□□□ 0.27
PMS1P54277 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 RRP7BP-205ENST00000566851 833 ntBASIC16.71■□□□□ 0.27
PMS1P54277 AC120045.2-201ENST00000567334 178 ntBASIC16.71■□□□□ 0.27
PMS1P54277 AC124283.3-201ENST00000570869 594 ntBASIC16.71■□□□□ 0.27
PMS1P54277 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.71■□□□□ 0.27
PMS1P54277 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.71■□□□□ 0.27
PMS1P54277 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.71■□□□□ 0.27
PMS1P54277 PRSS30P-206ENST00000641773 873 ntBASIC16.71■□□□□ 0.27
PMS1P54277 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PMS1P54277 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.71■□□□□ 0.27
PMS1P54277 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.71■□□□□ 0.27
PMS1P54277 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.71■□□□□ 0.27
PMS1P54277 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.71■□□□□ 0.27
PMS1P54277 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.71■□□□□ 0.27
PMS1P54277 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PMS1P54277 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
PMS1P54277 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
PMS1P54277 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
PMS1P54277 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
PMS1P54277 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PMS1P54277 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 AC093004.1-201ENST00000508850 424 ntBASIC16.7■□□□□ 0.26
PMS1P54277 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.7■□□□□ 0.26
PMS1P54277 AL359711.2-201ENST00000563105 872 ntBASIC16.7■□□□□ 0.26
PMS1P54277 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.7■□□□□ 0.26
PMS1P54277 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.7■□□□□ 0.26
PMS1P54277 CHCHD2P3-201ENST00000603038 451 ntBASIC16.7■□□□□ 0.26
PMS1P54277 AC099568.2-201ENST00000609194 695 ntBASIC16.7■□□□□ 0.26
PMS1P54277 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PMS1P54277 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
PMS1P54277 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PMS1P54277 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms