Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC1P35251 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC1P35251 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RFC1P35251 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 AC134915.1-201ENST00000426461 574 ntBASIC16.07■□□□□ 0.16
RFC1P35251 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.07■□□□□ 0.16
RFC1P35251 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RFC1P35251 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 RPL13AP25-201ENST00000484130 612 ntBASIC16.07■□□□□ 0.16
RFC1P35251 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
RFC1P35251 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.07■□□□□ 0.16
RFC1P35251 AC120045.2-201ENST00000567334 178 ntBASIC16.07■□□□□ 0.16
RFC1P35251 MIR4745-201ENST00000577608 62 ntBASIC16.07■□□□□ 0.16
RFC1P35251 AC093813.1-201ENST00000605066 256 ntBASIC16.07■□□□□ 0.16
RFC1P35251 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC1P35251 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC1P35251 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 AL158070.2-201ENST00000623713 1621 ntBASIC16.07■□□□□ 0.16
RFC1P35251 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.07■□□□□ 0.16
RFC1P35251 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 INTS4P2-202ENST00000614726 2019 ntBASIC16.07■□□□□ 0.16
RFC1P35251 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
RFC1P35251 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFC1P35251 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 REXO1L5P-201ENST00000622260 2098 ntBASIC16.06■□□□□ 0.16
RFC1P35251 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC1P35251 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC1P35251 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC1P35251 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC1P35251 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.06■□□□□ 0.16
RFC1P35251 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RFC1P35251 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFC1P35251 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RFC1P35251 OR2I1P-210ENST00000642037 4691 ntBASIC16.06■□□□□ 0.16
RFC1P35251 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC1P35251 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC1P35251 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.05■□□□□ 0.16
RFC1P35251 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC1P35251 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms