Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
CCKBRP32239 AC092506.1-202ENST00000401022 528 ntBASIC14.62□□□□□ -0.07
CCKBRP32239 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.62□□□□□ -0.07
CCKBRP32239 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.62□□□□□ -0.07
CCKBRP32239 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.62□□□□□ -0.07
CCKBRP32239 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.62□□□□□ -0.07
CCKBRP32239 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 AC126915.1-201ENST00000522847 1038 ntBASIC14.62□□□□□ -0.07
CCKBRP32239 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 AC084364.1-201ENST00000551967 1556 ntBASIC14.62□□□□□ -0.07
CCKBRP32239 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.62□□□□□ -0.07
CCKBRP32239 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCKBRP32239 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCKBRP32239 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.62□□□□□ -0.07
CCKBRP32239 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CCKBRP32239 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 PCDHA3-202ENST00000532566 4594 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCKBRP32239 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.61□□□□□ -0.07
CCKBRP32239 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.61□□□□□ -0.07
CCKBRP32239 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.61□□□□□ -0.07
CCKBRP32239 COX5BP1-201ENST00000507622 393 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.61□□□□□ -0.07
CCKBRP32239 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 ACTG1P17-201ENST00000558391 1119 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.61□□□□□ -0.07
CCKBRP32239 AL603832.2-201ENST00000566195 2125 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.61□□□□□ -0.07
CCKBRP32239 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.61□□□□□ -0.07
CCKBRP32239 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.61□□□□□ -0.07
CCKBRP32239 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCKBRP32239 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.61□□□□□ -0.07
CCKBRP32239 AP003680.1-201ENST00000598970 3660 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 AC018735.1-201ENST00000437208 1502 ntBASIC14.61□□□□□ -0.07
CCKBRP32239 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.61□□□□□ -0.07
CCKBRP32239 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCKBRP32239 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCKBRP32239 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCKBRP32239 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCKBRP32239 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCKBRP32239 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCKBRP32239 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCKBRP32239 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCKBRP32239 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCKBRP32239 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.6□□□□□ -0.07
CCKBRP32239 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms