Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 CU639417.3-201ENST00000624240 1404 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.57□□□□□ -0.4
CCL3L1P16619 AL512384.1-201ENST00000406683 331 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 KLF2P2-201ENST00000416807 1039 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 TMEM14DP-201ENST00000422205 345 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 NUS1P3-201ENST00000423502 862 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 HLA-K-203ENST00000430151 1046 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 AC005225.4-201ENST00000557330 545 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.57□□□□□ -0.4
CCL3L1P16619 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 MIR5189-201ENST00000577370 114 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.57□□□□□ -0.4
CCL3L1P16619 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
CCL3L1P16619 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.57□□□□□ -0.4
CCL3L1P16619 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 IGHV3-72-202ENST00000621503 303 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.57□□□□□ -0.4
CCL3L1P16619 LINC02228-204ENST00000642115 2962 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 ACE3P-201ENST00000423435 1973 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.57□□□□□ -0.4
CCL3L1P16619 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CCL3L1P16619 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCL3L1P16619 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.57□□□□□ -0.4
CCL3L1P16619 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
CCL3L1P16619 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 AL645937.2-201ENST00000396808 931 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CCL3L1P16619 AL139094.1-201ENST00000405549 1188 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 NME2P1-201ENST00000426182 414 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCL3L1P16619 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.56□□□□□ -0.4
CCL3L1P16619 TTTY23B-201ENST00000442790 549 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.56□□□□□ -0.4
CCL3L1P16619 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 KRT17P7-201ENST00000451704 1104 ntBASIC12.56□□□□□ -0.4
CCL3L1P16619 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CCL3L1P16619 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms