Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.93□□□□□ -0.5
CD28P10747 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 AC084364.1-201ENST00000551967 1556 ntBASIC11.92□□□□□ -0.5
CD28P10747 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 AC092127.1-201ENST00000567093 3455 ntBASIC11.92□□□□□ -0.5
CD28P10747 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CD28P10747 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 MIR1247-201ENST00000408206 136 ntBASIC11.92□□□□□ -0.5
CD28P10747 BTBD6P1-201ENST00000412176 1267 ntBASIC11.92□□□□□ -0.5
CD28P10747 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 AC104306.2-201ENST00000451877 341 ntBASIC11.92□□□□□ -0.5
CD28P10747 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.92□□□□□ -0.5
CD28P10747 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.92□□□□□ -0.5
CD28P10747 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC11.92□□□□□ -0.5
CD28P10747 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 PRAL-201ENST00000624952 3286 ntBASIC11.92□□□□□ -0.5
CD28P10747 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.92□□□□□ -0.5
CD28P10747 AC007787.1-201ENST00000588095 1583 ntBASIC11.92□□□□□ -0.5
CD28P10747 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CD28P10747 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CD28P10747 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD28P10747 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CD28P10747 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CD28P10747 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 AL158070.2-201ENST00000623713 1621 ntBASIC11.91□□□□□ -0.5
CD28P10747 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.91□□□□□ -0.5
CD28P10747 GPAA1P2-201ENST00000417923 928 ntBASIC11.91□□□□□ -0.5
CD28P10747 AC007969.1-201ENST00000433675 447 ntBASIC11.91□□□□□ -0.5
CD28P10747 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 HOMER2P2-201ENST00000451621 847 ntBASIC11.91□□□□□ -0.5
CD28P10747 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.91□□□□□ -0.5
CD28P10747 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
CD28P10747 C2orf69P2-201ENST00000562032 1123 ntBASIC11.91□□□□□ -0.5
CD28P10747 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 AL022328.3-201ENST00000607943 679 ntBASIC11.91□□□□□ -0.5
CD28P10747 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.91□□□□□ -0.5
CD28P10747 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms