Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MBD4O95243 ZBED1P1-201ENST00000502364 1930 ntBASIC18.08■□□□□ 0.48
MBD4O95243 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.07■□□□□ 0.48
MBD4O95243 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MBD4O95243 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MBD4O95243 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MBD4O95243 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 AGAP7P-201ENST00000582299 2062 ntBASIC18.07■□□□□ 0.48
MBD4O95243 AGAP14-201ENST00000624701 2060 ntBASIC18.07■□□□□ 0.48
MBD4O95243 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.07■□□□□ 0.48
MBD4O95243 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.07■□□□□ 0.48
MBD4O95243 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 MESTP3-201ENST00000503460 968 ntBASIC18.07■□□□□ 0.48
MBD4O95243 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.07■□□□□ 0.48
MBD4O95243 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.07■□□□□ 0.48
MBD4O95243 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
MBD4O95243 AC106820.3-201ENST00000561653 397 ntBASIC18.07■□□□□ 0.48
MBD4O95243 AP006547.1-201ENST00000563435 692 ntBASIC18.07■□□□□ 0.48
MBD4O95243 MIR4741-201ENST00000579822 90 ntBASIC18.07■□□□□ 0.48
MBD4O95243 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
MBD4O95243 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.07■□□□□ 0.48
MBD4O95243 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.07■□□□□ 0.48
MBD4O95243 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MBD4O95243 AC104640.1-201ENST00000562617 2109 ntBASIC18.07■□□□□ 0.48
MBD4O95243 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MBD4O95243 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 LINC00528-201ENST00000600723 2160 ntBASIC18.06■□□□□ 0.48
MBD4O95243 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MBD4O95243 CNN2P10-201ENST00000443067 918 ntBASIC18.06■□□□□ 0.48
MBD4O95243 RPL13AP20-201ENST00000459725 609 ntBASIC18.06■□□□□ 0.48
MBD4O95243 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 COX5BP1-201ENST00000507622 393 ntBASIC18.06■□□□□ 0.48
MBD4O95243 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 C2orf69P2-201ENST00000562032 1123 ntBASIC18.06■□□□□ 0.48
MBD4O95243 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.06■□□□□ 0.48
MBD4O95243 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 AC073413.1-201ENST00000603927 732 ntBASIC18.06■□□□□ 0.48
MBD4O95243 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MBD4O95243 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.06■□□□□ 0.48
MBD4O95243 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MBD4O95243 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MBD4O95243 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.05■□□□□ 0.48
MBD4O95243 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
MBD4O95243 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.05■□□□□ 0.48
MBD4O95243 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
MBD4O95243 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MBD4O95243 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms