Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 GHSR-202ENST00000427970 912 ntBASIC16.07■□□□□ 0.16
RTN3O95197 RPS2P32-201ENST00000439199 892 ntBASIC16.07■□□□□ 0.16
RTN3O95197 FO681548.1-201ENST00000455617 1132 ntBASIC16.07■□□□□ 0.16
RTN3O95197 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.07■□□□□ 0.16
RTN3O95197 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.07■□□□□ 0.16
RTN3O95197 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN3O95197 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN3O95197 MIR4259-201ENST00000584466 101 ntBASIC16.07■□□□□ 0.16
RTN3O95197 AC244669.2-201ENST00000612320 853 ntBASIC16.07■□□□□ 0.16
RTN3O95197 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.07■□□□□ 0.16
RTN3O95197 RHOXF1P1-202ENST00000635473 501 ntBASIC16.07■□□□□ 0.16
RTN3O95197 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RTN3O95197 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RTN3O95197 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.07■□□□□ 0.16
RTN3O95197 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RTN3O95197 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.07■□□□□ 0.16
RTN3O95197 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RTN3O95197 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RTN3O95197 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 AC015656.1-201ENST00000624209 3578 ntBASIC16.06■□□□□ 0.16
RTN3O95197 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RTN3O95197 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 AC148477.4-201ENST00000613430 1793 ntBASIC16.06■□□□□ 0.16
RTN3O95197 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.06■□□□□ 0.16
RTN3O95197 AL138709.1-201ENST00000614840 1693 ntBASIC16.06■□□□□ 0.16
RTN3O95197 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.06■□□□□ 0.16
RTN3O95197 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.06■□□□□ 0.16
RTN3O95197 CNN2P8-201ENST00000421872 913 ntBASIC16.06■□□□□ 0.16
RTN3O95197 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RTN3O95197 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.06■□□□□ 0.16
RTN3O95197 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.06■□□□□ 0.16
RTN3O95197 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.06■□□□□ 0.16
RTN3O95197 AL603764.1-201ENST00000636452 321 ntBASIC16.06■□□□□ 0.16
RTN3O95197 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.06■□□□□ 0.16
RTN3O95197 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RTN3O95197 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RTN3O95197 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN3O95197 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 AC022532.1-201ENST00000624563 1728 ntBASIC16.05■□□□□ 0.16
RTN3O95197 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RTN3O95197 AC079781.5-202ENST00000641784 3743 ntBASIC16.05■□□□□ 0.16
RTN3O95197 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RTN3O95197 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RTN3O95197 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN3O95197 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RTN3O95197 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms