Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP2AO43633 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP2AO43633 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP2AO43633 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP2AO43633 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHMP2AO43633 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHMP2AO43633 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP2AO43633 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP2AO43633 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP2AO43633 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP2AO43633 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.11■□□□□ 0.33
CHMP2AO43633 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP2AO43633 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.11■□□□□ 0.33
CHMP2AO43633 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHMP2AO43633 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP2AO43633 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP2AO43633 ECM1P1-201ENST00000604092 1279 ntBASIC17.11■□□□□ 0.33
CHMP2AO43633 COX11-210ENST00000639671 696 ntBASIC17.11■□□□□ 0.33
CHMP2AO43633 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHMP2AO43633 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHMP2AO43633 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP2AO43633 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHMP2AO43633 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP2AO43633 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP2AO43633 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP2AO43633 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.1■□□□□ 0.33
CHMP2AO43633 RPL7P3-201ENST00000441388 714 ntBASIC17.1■□□□□ 0.33
CHMP2AO43633 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CHMP2AO43633 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 AC022616.1-201ENST00000518688 554 ntBASIC17.1■□□□□ 0.33
CHMP2AO43633 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 AC138951.2-201ENST00000623455 1161 ntBASIC17.1■□□□□ 0.33
CHMP2AO43633 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.1■□□□□ 0.33
CHMP2AO43633 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 PCDHA3-202ENST00000532566 4594 ntBASIC17.1■□□□□ 0.33
CHMP2AO43633 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHMP2AO43633 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.1■□□□□ 0.33
CHMP2AO43633 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.1■□□□□ 0.33
CHMP2AO43633 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP2AO43633 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CHMP2AO43633 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP2AO43633 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms