Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC012362.1-201ENST00000434906 739 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 MIR4522-201ENST00000584932 87 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 AL583805.1-201ENST00000391389 531 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC234644.1-201ENST00000406065 370 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 XBP1P1-201ENST00000436573 652 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC018463.1-201ENST00000456674 917 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.21■□□□□ 0.83
SBNO1A3KN83 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC093752.3-201ENST00000567343 901 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC105137.3-201ENST00000617588 984 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 AC025262.2-201ENST00000623975 1056 ntBASIC20.21■□□□□ 0.83
SBNO1A3KN83 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
SBNO1A3KN83 PCDHA1-201ENST00000378133 2726 ntBASIC20.2■□□□□ 0.83
SBNO1A3KN83 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 KRT8P31-201ENST00000504812 1408 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 MIR1227-201ENST00000408484 88 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 KRT18P36-201ENST00000411618 1276 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 AL627422.1-201ENST00000434104 580 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 DUTP3-201ENST00000450025 415 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SBNO1A3KN83 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 AC027601.3-201ENST00000622907 509 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 AL161773.1-201ENST00000624845 863 ntBASIC20.2■□□□□ 0.82
SBNO1A3KN83 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.2■□□□□ 0.82
SBNO1A3KN83 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 AC020658.6-201ENST00000623564 1870 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 AC015909.3-201ENST00000572855 1794 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 PRAL-201ENST00000624952 3286 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 LYPLA2P1-203ENST00000447689 696 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms