Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 AGER-203ENST00000375065 665 ntTSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 SCARNA20.5-201ENST00000516991 142 ntBASIC22.1■■□□□ 1.13
HFM1A2PYH4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 MIR6720-201ENST00000611664 98 ntBASIC22.1■■□□□ 1.13
HFM1A2PYH4 AL023803.2-201ENST00000620080 638 ntBASIC22.1■■□□□ 1.13
HFM1A2PYH4 AC068587.8-201ENST00000641239 219 ntBASIC22.1■■□□□ 1.13
HFM1A2PYH4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 KHSRPP1-201ENST00000427983 1768 ntBASIC22.1■■□□□ 1.13
HFM1A2PYH4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
HFM1A2PYH4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC22.09■■□□□ 1.13
HFM1A2PYH4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 DPM3-202ENST00000368399 517 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 AC016700.1-201ENST00000429424 312 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC22.09■■□□□ 1.13
HFM1A2PYH4 NKAIN1P1-201ENST00000435754 582 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 AC022217.1-201ENST00000521069 738 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
HFM1A2PYH4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC22.09■■□□□ 1.13
HFM1A2PYH4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC22.09■■□□□ 1.13
HFM1A2PYH4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 FGD5P1-202ENST00000614866 2498 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 AC144831.1-201ENST00000573312 2656 ntBASIC22.09■■□□□ 1.13
HFM1A2PYH4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HFM1A2PYH4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HFM1A2PYH4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AL008718.2-201ENST00000609206 1313 ntBASIC22.08■■□□□ 1.13
HFM1A2PYH4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
HFM1A2PYH4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HFM1A2PYH4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 FAM58BP-201ENST00000439056 645 ntBASIC22.08■■□□□ 1.13
HFM1A2PYH4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 TUBB8P8-201ENST00000458717 1058 ntBASIC22.08■■□□□ 1.13
HFM1A2PYH4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AP001258.2-201ENST00000529891 490 ntBASIC22.08■■□□□ 1.13
HFM1A2PYH4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AL645939.5-201ENST00000606834 243 ntBASIC22.08■■□□□ 1.13
HFM1A2PYH4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AC139712.1-201ENST00000378256 1875 ntBASIC22.08■■□□□ 1.13
HFM1A2PYH4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HFM1A2PYH4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
HFM1A2PYH4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HFM1A2PYH4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC22.08■■□□□ 1.12
HFM1A2PYH4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
HFM1A2PYH4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HFM1A2PYH4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HFM1A2PYH4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
HFM1A2PYH4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
HFM1A2PYH4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
HFM1A2PYH4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
HFM1A2PYH4 AC138028.6-201ENST00000616106 1482 ntBASIC22.07■■□□□ 1.12
HFM1A2PYH4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 RNMTL1P1-201ENST00000454103 560 ntBASIC22.07■■□□□ 1.12
HFM1A2PYH4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
HFM1A2PYH4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms