Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 BAATP1-201ENST00000412284 1225 ntBASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 KRT18P25-201ENST00000508931 1278 ntBASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AC068587.3-201ENST00000526613 355 ntBASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AC015936.2-201ENST00000593177 259 ntBASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 KRT8P14-201ENST00000414254 1442 ntBASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 AC134312.5-201ENST00000568031 1313 ntBASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAI2Q9Y5P3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAI2Q9Y5P3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms