Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SDHAF3Q9NRP4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SDHAF3Q9NRP4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDHAF3Q9NRP4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.04□□□□□ -0.16
SDHAF3Q9NRP4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDHAF3Q9NRP4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SDHAF3Q9NRP4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC007389.4-201ENST00000454674 793 ntBASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AP005018.1-201ENST00000525475 301 ntBASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AP005019.2-201ENST00000615104 511 ntBASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC093525.8-201ENST00000624099 1342 ntBASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC023024.2-201ENST00000623561 1993 ntBASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SDHAF3Q9NRP4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 AC126177.1-201ENST00000547829 2218 ntBASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SDHAF3Q9NRP4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 PTP4A1P2-201ENST00000546033 454 ntBASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 AC005225.4-201ENST00000557330 545 ntBASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SDHAF3Q9NRP4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms