Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AMBRA1Q9C0C7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 KRT18P64-201ENST00000434946 1219 ntBASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 MTND6P24-201ENST00000440466 518 ntBASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 SLED1-202ENST00000512051 380 ntBASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 MIR6080-201ENST00000617359 66 ntBASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 AC018442.1-201ENST00000421439 2061 ntBASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 CICP17-201ENST00000418553 2377 ntBASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AMBRA1Q9C0C7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 AC190387.1-201ENST00000551683 408 ntBASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 AL035456.1-201ENST00000456064 1369 ntBASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AMBRA1Q9C0C7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms