Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC091046.1-201ENST00000331871 207 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 MIR1247-201ENST00000408206 136 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC004945.1-201ENST00000416738 983 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 POM121L8P-201ENST00000417732 1281 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 BCYRN1-201ENST00000418539 200 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 POM121L9P-203ENST00000441984 1285 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 CNN2P10-201ENST00000443067 918 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 HIST2H2BC-201ENST00000498492 580 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 MIR4783-201ENST00000580343 82 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC104982.3-201ENST00000581995 514 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 GAPDHP74-202ENST00000632456 782 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC006453.4-201ENST00000636949 1252 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC008687.7-202ENST00000637404 953 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 AC015656.1-201ENST00000624209 3578 ntBASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
KRTAP4-3Q9BYR4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms