Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APH1AQ96BI3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 ACTBP8-201ENST00000403258 1108 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 AC234783.1-201ENST00000441761 496 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 BCRP2-202ENST00000447763 634 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 GPR53P-205ENST00000457298 1084 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 BCRP6-201ENST00000510112 632 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 BCRP7-201ENST00000511549 544 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 MSTO2P-201ENST00000314835 1709 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APH1AQ96BI3 AC023824.1-201ENST00000562945 2975 ntBASIC13.52□□□□□ -0.25
APH1AQ96BI3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APH1AQ96BI3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 AL109954.1-202ENST00000564051 2148 ntBASIC13.51□□□□□ -0.25
APH1AQ96BI3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 KRT8P14-201ENST00000414254 1442 ntBASIC13.51□□□□□ -0.25
APH1AQ96BI3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 WASH3P-207ENST00000560956 1394 ntBASIC13.51□□□□□ -0.25
APH1AQ96BI3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 KRT17P8-201ENST00000540749 863 ntBASIC13.51□□□□□ -0.25
APH1AQ96BI3 RAB43P1-201ENST00000561790 589 ntBASIC13.51□□□□□ -0.25
APH1AQ96BI3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms