Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM54Q969K7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM54Q969K7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 AC018665.1-201ENST00000622927 1362 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 RN7SL837P-201ENST00000463010 287 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 RN7SL692P-201ENST00000464677 288 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 TDH-203ENST00000531764 1110 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 PTP4A1P2-201ENST00000546033 454 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 AC134312.5-201ENST00000568031 1313 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 AP002414.2-201ENST00000591780 3365 ntBASIC13.37□□□□□ -0.27
TMEM54Q969K7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM54Q969K7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM54Q969K7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 MSTO2P-201ENST00000314835 1709 ntBASIC13.36□□□□□ -0.27
TMEM54Q969K7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM54Q969K7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM54Q969K7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms