Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 TMEM198B-204ENST00000484016 896 ntBASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 NUP210P1-202ENST00000504322 710 ntBASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 MIR4722-201ENST00000578292 60 ntBASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 RN7SL163P-201ENST00000583100 276 ntBASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS3Q8IXF0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 PAUPAR-201ENST00000630360 2965 ntBASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MPRIPP1-201ENST00000452433 1089 ntBASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MIR3907-201ENST00000579424 151 ntBASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AC009955.4-201ENST00000597192 544 ntBASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AC002472.3-201ENST00000640124 621 ntBASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS3Q8IXF0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS3Q8IXF0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms