Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 CROCCP4-201ENST00000457096 498 ntBASIC15.02■□□□□ -0
TRIM48Q8IWZ4 AC004066.1-201ENST00000502488 802 ntBASIC15.02■□□□□ -0
TRIM48Q8IWZ4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.02■□□□□ -0
TRIM48Q8IWZ4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM48Q8IWZ4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AC104989.1-201ENST00000519711 778 ntBASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AP001889.1-201ENST00000525414 633 ntBASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AC133552.6-201ENST00000613406 534 ntBASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AP005019.2-201ENST00000615104 511 ntBASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM48Q8IWZ4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 MIR1909-201ENST00000411312 80 ntBASIC15□□□□□ -0.01
TRIM48Q8IWZ4 NUS1P3-201ENST00000423502 862 ntBASIC15□□□□□ -0.01
TRIM48Q8IWZ4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 C2orf27AP3-201ENST00000434123 579 ntBASIC15□□□□□ -0.01
TRIM48Q8IWZ4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRIM48Q8IWZ4 AC022137.2-201ENST00000503482 481 ntBASIC15□□□□□ -0.01
TRIM48Q8IWZ4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms