Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC50Q8IVM0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC50Q8IVM0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 RN7SL618P-201ENST00000477850 296 ntBASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 SPDYE12P-201ENST00000618416 771 ntBASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 AC079781.5-202ENST00000641784 3743 ntBASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC50Q8IVM0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 ACE3P-201ENST00000423435 1973 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AL133267.1-201ENST00000398220 340 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AC015922.1-201ENST00000421102 1152 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AC109322.1-201ENST00000524499 1264 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 LINC01115-203ENST00000606068 577 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC50Q8IVM0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC50Q8IVM0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms