Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 SLED1-202ENST00000512051 380 ntBASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AL133267.1-201ENST00000398220 340 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC104457.1-201ENST00000401024 814 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC023274.1-201ENST00000418278 595 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC025181.2-201ENST00000606994 802 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC018529.1-201ENST00000613063 361 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 FAM197Y3-203ENST00000618346 717 ntBASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NUDCD3Q8IVD9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms