Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AP001889.1-201ENST00000525414 633 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AC106886.1-201ENST00000568660 600 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AC009486.1-201ENST00000569860 813 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AC091951.1-201ENST00000512854 2465 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AC087481.3-201ENST00000602886 1894 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC012441.1-201ENST00000446669 685 ntBASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AL008721.1-201ENST00000609964 604 ntBASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 LINC00552-201ENST00000625151 2579 ntBASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RFWD3Q6PCD5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFWD3Q6PCD5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms