Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.71□□□□□ -0.53
Sdc3Q64519 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.71□□□□□ -0.53
Sdc3Q64519 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.71□□□□□ -0.53
Sdc3Q64519 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sdc3Q64519 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.71□□□□□ -0.54
Sdc3Q64519 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sdc3Q64519 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.71□□□□□ -0.54
Sdc3Q64519 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.71□□□□□ -0.54
Sdc3Q64519 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.71□□□□□ -0.54
Sdc3Q64519 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Sdc3Q64519 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sdc3Q64519 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sdc3Q64519 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm14017-201ENSMUST00000121934 386 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm18827-201ENSMUST00000188341 790 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm5363-201ENSMUST00000211927 938 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm26035-201ENSMUST00000083065 308 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.7□□□□□ -0.54
Sdc3Q64519 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sdc3Q64519 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.7□□□□□ -0.54
Sdc3Q64519 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sdc3Q64519 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sdc3Q64519 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sdc3Q64519 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.69□□□□□ -0.54
Sdc3Q64519 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.69□□□□□ -0.54
Sdc3Q64519 Gm6963-201ENSMUST00000147879 379 ntBASIC11.69□□□□□ -0.54
Sdc3Q64519 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sdc3Q64519 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms