Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 MESTP3-201ENST00000503460 968 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 LINC00634-202ENST00000505157 222 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 RN7SL470P-201ENST00000583069 259 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AC002472.3-201ENST00000640124 621 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AC004554.1-201ENST00000422830 1468 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 IL9RP3-201ENST00000442856 1674 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 MBLAC2-202ENST00000514906 1936 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A7P-201ENST00000382628 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A23P-201ENST00000400136 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A21P-201ENST00000510875 1396 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A15P-201ENST00000514465 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A6P-201ENST00000515148 1394 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A16P-201ENST00000526662 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A9P-201ENST00000527940 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A5P-201ENST00000528738 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A14P-201ENST00000530386 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 FAM90A13P-201ENST00000534703 1395 ntBASIC14.6□□□□□ -0.07
RSPO4Q2I0M5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AC012441.2-201ENST00000444843 739 ntBASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 NDUFS6P1-201ENST00000485187 316 ntBASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 SIGLEC18P-201ENST00000602271 909 ntBASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 PEBP1P2-201ENST00000603980 558 ntBASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 MEG3_2.1-201ENST00000611456 105 ntBASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.59□□□□□ -0.07
RSPO4Q2I0M5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
RSPO4Q2I0M5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RSPO4Q2I0M5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RSPO4Q2I0M5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RSPO4Q2I0M5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RSPO4Q2I0M5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms