Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN20P56880 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN20P56880 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN20P56880 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN20P56880 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 AC098614.1-201ENST00000368528 745 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CLDN20P56880 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN20P56880 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 COX5BP8-201ENST00000416911 349 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 AC005034.1-201ENST00000426657 489 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.02□□□□□ -0.17
CLDN20P56880 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN20P56880 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN20P56880 RN7SL752P-201ENST00000463779 287 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN20P56880 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN20P56880 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN20P56880 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN20P56880 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN20P56880 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN20P56880 BRI3BPP1-201ENST00000594224 787 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.02□□□□□ -0.17
CLDN20P56880 AL049840.4-201ENST00000602422 811 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN20P56880 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 AGAP7P-201ENST00000582299 2062 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 AGAP14-201ENST00000624701 2060 ntBASIC14.02□□□□□ -0.17
CLDN20P56880 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN20P56880 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
CLDN20P56880 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN20P56880 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 NME2P1-201ENST00000426182 414 ntBASIC14.01□□□□□ -0.17
CLDN20P56880 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN20P56880 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN20P56880 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 VDAC1P7-201ENST00000462417 847 ntBASIC14.01□□□□□ -0.17
CLDN20P56880 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN20P56880 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.01□□□□□ -0.17
CLDN20P56880 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN20P56880 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN20P56880 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN20P56880 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms