Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 AC023157.3-201ENST00000619086 2088 ntBASIC14.99□□□□□ -0.01
LIMK1P53667 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LIMK1P53667 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 AC021723.1-201ENST00000486306 515 ntBASIC14.99□□□□□ -0.01
LIMK1P53667 AC135983.4-201ENST00000564116 1262 ntBASIC14.99□□□□□ -0.01
LIMK1P53667 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.99□□□□□ -0.01
LIMK1P53667 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.99□□□□□ -0.01
LIMK1P53667 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 AP001002.3-201ENST00000623482 206 ntBASIC14.99□□□□□ -0.01
LIMK1P53667 PRSS30P-206ENST00000641773 873 ntBASIC14.99□□□□□ -0.01
LIMK1P53667 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.99□□□□□ -0.01
LIMK1P53667 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK1P53667 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK1P53667 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK1P53667 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK1P53667 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LIMK1P53667 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK1P53667 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LIMK1P53667 AL627389.1-201ENST00000413508 1182 ntBASIC14.98□□□□□ -0.01
LIMK1P53667 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.98□□□□□ -0.01
LIMK1P53667 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.98□□□□□ -0.01
LIMK1P53667 CEP164P1-201ENST00000455142 418 ntBASIC14.98□□□□□ -0.01
LIMK1P53667 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.98□□□□□ -0.01
LIMK1P53667 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 RN7SL163P-201ENST00000583100 276 ntBASIC14.98□□□□□ -0.01
LIMK1P53667 AC020922.3-201ENST00000595064 547 ntBASIC14.98□□□□□ -0.01
LIMK1P53667 BNIP3P13-201ENST00000599968 566 ntBASIC14.98□□□□□ -0.01
LIMK1P53667 AC025181.2-201ENST00000606994 802 ntBASIC14.98□□□□□ -0.01
LIMK1P53667 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK1P53667 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LIMK1P53667 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK1P53667 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK1P53667 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK1P53667 AC006449.6-201ENST00000612330 2296 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms