Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CLCN4P51793 MAGEA5-201ENST00000446757 942 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN4P51793 AC104073.2-201ENST00000453737 312 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 NUP210P1-202ENST00000504322 710 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 MARK2P5-201ENST00000507649 634 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN4P51793 MIR3907-201ENST00000579424 151 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCN4P51793 AC005324.6-201ENST00000587972 613 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 AC009955.4-201ENST00000597192 544 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN4P51793 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 AL136301.1-201ENST00000615830 422 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN4P51793 AC128714.1-201ENST00000637035 887 ntBASIC15.9■□□□□ 0.14
CLCN4P51793 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN4P51793 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCN4P51793 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCN4P51793 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCN4P51793 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CLCN4P51793 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.89■□□□□ 0.13
CLCN4P51793 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCN4P51793 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCN4P51793 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCN4P51793 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.89■□□□□ 0.13
CLCN4P51793 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.89■□□□□ 0.13
CLCN4P51793 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCN4P51793 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.89■□□□□ 0.13
CLCN4P51793 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 AC079336.7-201ENST00000623428 1078 ntBASIC15.89■□□□□ 0.13
CLCN4P51793 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 AL805961.1-203ENST00000641078 1258 ntBASIC15.89■□□□□ 0.13
CLCN4P51793 AC068587.8-201ENST00000641239 219 ntBASIC15.89■□□□□ 0.13
CLCN4P51793 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCN4P51793 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLCN4P51793 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCN4P51793 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN4P51793 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLCN4P51793 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCN4P51793 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCN4P51793 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 CICP13-201ENST00000422015 2789 ntBASIC15.88■□□□□ 0.13
CLCN4P51793 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CLCN4P51793 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCN4P51793 PAUPAR-201ENST00000630360 2965 ntBASIC15.88■□□□□ 0.13
CLCN4P51793 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.88■□□□□ 0.13
CLCN4P51793 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCN4P51793 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCN4P51793 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms