Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC055876.3-201ENST00000431496 288 ntBASIC17.88■□□□□ 0.45
MRE11P49959 FAM58CP-201ENST00000435741 640 ntBASIC17.88■□□□□ 0.45
MRE11P49959 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.88■□□□□ 0.45
MRE11P49959 CRB3P1-201ENST00000449338 276 ntBASIC17.88■□□□□ 0.45
MRE11P49959 UGT1A2P-201ENST00000454886 866 ntBASIC17.88■□□□□ 0.45
MRE11P49959 AC023141.5-201ENST00000458585 616 ntBASIC17.88■□□□□ 0.45
MRE11P49959 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.88■□□□□ 0.45
MRE11P49959 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.88■□□□□ 0.45
MRE11P49959 AC136632.2-201ENST00000512891 861 ntBASIC17.88■□□□□ 0.45
MRE11P49959 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.88■□□□□ 0.45
MRE11P49959 AC015911.4-201ENST00000588022 1070 ntBASIC17.88■□□□□ 0.45
MRE11P49959 MIR4321-201ENST00000592276 80 ntBASIC17.88■□□□□ 0.45
MRE11P49959 AC138649.4-201ENST00000612222 287 ntBASIC17.88■□□□□ 0.45
MRE11P49959 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MRE11P49959 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.88■□□□□ 0.45
MRE11P49959 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRE11P49959 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 PI4KAP1-204ENST00000612579 1703 ntBASIC17.87■□□□□ 0.45
MRE11P49959 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MRE11P49959 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MRE11P49959 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
MRE11P49959 AC073621.1-201ENST00000392730 636 ntBASIC17.87■□□□□ 0.45
MRE11P49959 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.87■□□□□ 0.45
MRE11P49959 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC17.87■□□□□ 0.45
MRE11P49959 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.87■□□□□ 0.45
MRE11P49959 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MRE11P49959 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MRE11P49959 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.86■□□□□ 0.45
MRE11P49959 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.86■□□□□ 0.45
MRE11P49959 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.86■□□□□ 0.45
MRE11P49959 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MRE11P49959 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
MRE11P49959 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.86■□□□□ 0.45
MRE11P49959 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
MRE11P49959 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.86■□□□□ 0.45
MRE11P49959 AC004945.1-201ENST00000416738 983 ntBASIC17.86■□□□□ 0.45
MRE11P49959 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.86■□□□□ 0.45
MRE11P49959 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MRE11P49959 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MRE11P49959 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
MRE11P49959 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.86■□□□□ 0.45
MRE11P49959 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.86■□□□□ 0.45
MRE11P49959 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms