Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.92■□□□□ 0.3
TM4SF4P48230 AC007292.2-201ENST00000593524 1812 ntBASIC16.91■□□□□ 0.3
TM4SF4P48230 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.91■□□□□ 0.3
TM4SF4P48230 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TM4SF4P48230 AL359258.3-201ENST00000622910 2331 ntBASIC16.91■□□□□ 0.3
TM4SF4P48230 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TM4SF4P48230 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.91■□□□□ 0.3
TM4SF4P48230 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.91■□□□□ 0.3
TM4SF4P48230 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TM4SF4P48230 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TM4SF4P48230 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.91■□□□□ 0.3
TM4SF4P48230 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TM4SF4P48230 MIR566-201ENST00000385187 94 ntBASIC16.91■□□□□ 0.3
TM4SF4P48230 RN7SKP109-201ENST00000410592 316 ntBASIC16.91■□□□□ 0.3
TM4SF4P48230 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.91■□□□□ 0.3
TM4SF4P48230 KRT8P1-201ENST00000557533 1207 ntBASIC16.91■□□□□ 0.3
TM4SF4P48230 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.91■□□□□ 0.3
TM4SF4P48230 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.91■□□□□ 0.3
TM4SF4P48230 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TM4SF4P48230 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TM4SF4P48230 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 AC004554.1-201ENST00000422830 1468 ntBASIC16.91■□□□□ 0.3
TM4SF4P48230 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TM4SF4P48230 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TM4SF4P48230 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TM4SF4P48230 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.9■□□□□ 0.3
TM4SF4P48230 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
TM4SF4P48230 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.9■□□□□ 0.3
TM4SF4P48230 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TM4SF4P48230 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 SERBP1P2-201ENST00000436888 1164 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 RN7SL23P-201ENST00000484055 275 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.9■□□□□ 0.3
TM4SF4P48230 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.9■□□□□ 0.3
TM4SF4P48230 AC226150.1-201ENST00000544259 466 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 HMGB1P24-201ENST00000611897 328 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 MIR6746-201ENST00000620971 63 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.9■□□□□ 0.3
TM4SF4P48230 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TM4SF4P48230 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TM4SF4P48230 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TM4SF4P48230 CTBP2P8-201ENST00000422584 1330 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 AC009090.5-201ENST00000624886 2285 ntBASIC16.9■□□□□ 0.3
TM4SF4P48230 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TM4SF4P48230 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TM4SF4P48230 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TM4SF4P48230 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
TM4SF4P48230 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.89■□□□□ 0.3
TM4SF4P48230 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TM4SF4P48230 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 AC022211.2-201ENST00000585075 2527 ntBASIC16.89■□□□□ 0.29
TM4SF4P48230 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.89■□□□□ 0.29
TM4SF4P48230 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TM4SF4P48230 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.89■□□□□ 0.29
TM4SF4P48230 AC073869.2-201ENST00000417338 1026 ntBASIC16.89■□□□□ 0.29
TM4SF4P48230 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.89■□□□□ 0.29
TM4SF4P48230 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TM4SF4P48230 AC093826.1-201ENST00000508655 993 ntBASIC16.89■□□□□ 0.29
TM4SF4P48230 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms