Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 SBF1P1-201ENST00000444527 5631 ntBASIC14.84□□□□□ -0.03
HNF4AP41235 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
HNF4AP41235 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HNF4AP41235 ACE3P-201ENST00000423435 1973 ntBASIC14.84□□□□□ -0.03
HNF4AP41235 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
HNF4AP41235 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HNF4AP41235 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HNF4AP41235 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
HNF4AP41235 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HNF4AP41235 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HNF4AP41235 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HNF4AP41235 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HNF4AP41235 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.83□□□□□ -0.04
HNF4AP41235 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 GAPDHP40-201ENST00000505218 1006 ntBASIC14.83□□□□□ -0.04
HNF4AP41235 TERF1P3-201ENST00000505638 1227 ntBASIC14.83□□□□□ -0.04
HNF4AP41235 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.83□□□□□ -0.04
HNF4AP41235 AC093004.1-201ENST00000508850 424 ntBASIC14.83□□□□□ -0.04
HNF4AP41235 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.83□□□□□ -0.04
HNF4AP41235 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.83□□□□□ -0.04
HNF4AP41235 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 MIR8072-201ENST00000614241 80 ntBASIC14.83□□□□□ -0.04
HNF4AP41235 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
HNF4AP41235 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HNF4AP41235 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HNF4AP41235 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.83□□□□□ -0.04
HNF4AP41235 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.82□□□□□ -0.04
HNF4AP41235 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
HNF4AP41235 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.82□□□□□ -0.04
HNF4AP41235 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HNF4AP41235 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HNF4AP41235 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HNF4AP41235 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.82□□□□□ -0.04
HNF4AP41235 RN7SL399P-201ENST00000471648 279 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms