Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.58□□□□□ -0.24
HOXC12P31275 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
HOXC12P31275 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
HOXC12P31275 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 AC087481.3-201ENST00000602886 1894 ntBASIC13.58□□□□□ -0.24
HOXC12P31275 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HOXC12P31275 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HOXC12P31275 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.58□□□□□ -0.24
HOXC12P31275 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.57□□□□□ -0.24
HOXC12P31275 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 AC099336.1-201ENST00000417053 1171 ntBASIC13.57□□□□□ -0.24
HOXC12P31275 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.57□□□□□ -0.24
HOXC12P31275 CSF2RBP1-201ENST00000447905 391 ntBASIC13.57□□□□□ -0.24
HOXC12P31275 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.57□□□□□ -0.24
HOXC12P31275 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.57□□□□□ -0.24
HOXC12P31275 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.57□□□□□ -0.24
HOXC12P31275 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 AL359711.2-201ENST00000563105 872 ntBASIC13.57□□□□□ -0.24
HOXC12P31275 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.57□□□□□ -0.24
HOXC12P31275 AC107373.2-201ENST00000607735 490 ntBASIC13.57□□□□□ -0.24
HOXC12P31275 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.57□□□□□ -0.24
HOXC12P31275 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HOXC12P31275 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
HOXC12P31275 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.56□□□□□ -0.24
HOXC12P31275 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HOXC12P31275 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms