Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.05□□□□□ -0.16
ABCD3P28288 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.05□□□□□ -0.16
ABCD3P28288 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.05□□□□□ -0.16
ABCD3P28288 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 BTNL10-201ENST00000595971 695 ntBASIC14.05□□□□□ -0.16
ABCD3P28288 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 AC018665.1-201ENST00000622927 1362 ntBASIC14.05□□□□□ -0.16
ABCD3P28288 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ABCD3P28288 LRRC59-203ENST00000576448 1531 ntBASIC14.05□□□□□ -0.16
ABCD3P28288 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.05□□□□□ -0.16
ABCD3P28288 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.05□□□□□ -0.16
ABCD3P28288 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 AGAP7P-201ENST00000582299 2062 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 AGAP14-201ENST00000624701 2060 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.04□□□□□ -0.16
ABCD3P28288 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.04□□□□□ -0.16
ABCD3P28288 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.04□□□□□ -0.16
ABCD3P28288 BCRP2-202ENST00000447763 634 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.04□□□□□ -0.16
ABCD3P28288 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 AC106760.1-201ENST00000508690 800 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 BCRP6-201ENST00000510112 632 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 BCRP7-201ENST00000511549 544 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.04□□□□□ -0.16
ABCD3P28288 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.04□□□□□ -0.16
ABCD3P28288 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.04□□□□□ -0.16
ABCD3P28288 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 AL022328.1-201ENST00000610050 478 ntBASIC14.04□□□□□ -0.16
ABCD3P28288 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.04□□□□□ -0.16
ABCD3P28288 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ABCD3P28288 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ABCD3P28288 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ABCD3P28288 ZBED1P1-201ENST00000502364 1930 ntBASIC14.03□□□□□ -0.16
ABCD3P28288 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms