Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC007686.3-201ENST00000619017 3487 ntBASIC15.08■□□□□ 0.01
CAPN1P07384 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CAPN1P07384 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.08■□□□□ 0.01
CAPN1P07384 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
CAPN1P07384 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0.01
CAPN1P07384 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CAPN1P07384 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CAPN1P07384 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 Z97205.2-201ENST00000564697 1639 ntBASIC15.08■□□□□ 0
CAPN1P07384 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.08■□□□□ 0
CAPN1P07384 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 KRT18P64-201ENST00000434946 1219 ntBASIC15.08■□□□□ 0
CAPN1P07384 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 AC055876.2-201ENST00000531834 546 ntBASIC15.08■□□□□ 0
CAPN1P07384 TPRX2P-201ENST00000535362 881 ntBASIC15.08■□□□□ 0
CAPN1P07384 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
CAPN1P07384 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.08■□□□□ 0
CAPN1P07384 AC099568.2-201ENST00000609194 695 ntBASIC15.08■□□□□ 0
CAPN1P07384 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.08■□□□□ 0
CAPN1P07384 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.08■□□□□ 0
CAPN1P07384 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CAPN1P07384 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.08■□□□□ 0
CAPN1P07384 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.08■□□□□ 0
CAPN1P07384 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.08■□□□□ 0
CAPN1P07384 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 FGD5P1-202ENST00000614866 2498 ntBASIC15.07■□□□□ 0
CAPN1P07384 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.07■□□□□ 0
CAPN1P07384 FAM45BP-202ENST00000592932 1624 ntBASIC15.07■□□□□ 0
CAPN1P07384 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.07■□□□□ 0
CAPN1P07384 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
CAPN1P07384 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CAPN1P07384 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.07■□□□□ 0
CAPN1P07384 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.07■□□□□ 0
CAPN1P07384 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.07■□□□□ 0
CAPN1P07384 IGHV3-72-202ENST00000621503 303 ntBASIC15.07■□□□□ 0
CAPN1P07384 AC007431.3-201ENST00000623221 587 ntBASIC15.07■□□□□ 0
CAPN1P07384 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CAPN1P07384 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.07■□□□□ 0
CAPN1P07384 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.07■□□□□ 0
CAPN1P07384 WASH3P-207ENST00000560956 1394 ntBASIC15.07■□□□□ 0
CAPN1P07384 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms