Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 CD8B2-202ENST00000417670 633 ntBASIC15.92■□□□□ 0.14
BEST1O76090 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.92■□□□□ 0.14
BEST1O76090 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.92■□□□□ 0.14
BEST1O76090 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.92■□□□□ 0.14
BEST1O76090 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
BEST1O76090 AL583810.1-201ENST00000553344 1045 ntBASIC15.92■□□□□ 0.14
BEST1O76090 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.92■□□□□ 0.14
BEST1O76090 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.92■□□□□ 0.14
BEST1O76090 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.92■□□□□ 0.14
BEST1O76090 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.92■□□□□ 0.14
BEST1O76090 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BEST1O76090 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
BEST1O76090 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.92■□□□□ 0.14
BEST1O76090 AHCYP2-201ENST00000430630 1300 ntBASIC15.92■□□□□ 0.14
BEST1O76090 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
BEST1O76090 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST1O76090 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST1O76090 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BEST1O76090 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
BEST1O76090 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST1O76090 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BEST1O76090 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
BEST1O76090 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.91■□□□□ 0.14
BEST1O76090 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 AL391280.1-201ENST00000506969 1062 ntBASIC15.91■□□□□ 0.14
BEST1O76090 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
BEST1O76090 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST1O76090 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 AL033527.4-201ENST00000641026 673 ntBASIC15.91■□□□□ 0.14
BEST1O76090 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.91■□□□□ 0.14
BEST1O76090 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BEST1O76090 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
BEST1O76090 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.91■□□□□ 0.14
BEST1O76090 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BEST1O76090 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
BEST1O76090 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
BEST1O76090 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.9■□□□□ 0.14
BEST1O76090 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.9■□□□□ 0.14
BEST1O76090 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 MESTP3-201ENST00000503460 968 ntBASIC15.9■□□□□ 0.14
BEST1O76090 AC079316.1-201ENST00000548397 411 ntBASIC15.9■□□□□ 0.14
BEST1O76090 AC106820.3-201ENST00000561653 397 ntBASIC15.9■□□□□ 0.14
BEST1O76090 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.9■□□□□ 0.14
BEST1O76090 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.9■□□□□ 0.14
BEST1O76090 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 AC138466.3-201ENST00000619983 221 ntBASIC15.9■□□□□ 0.14
BEST1O76090 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms