Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.68■□□□□ 0.42
CTNND1O60716 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.68■□□□□ 0.42
CTNND1O60716 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.68■□□□□ 0.42
CTNND1O60716 AC104073.2-201ENST00000453737 312 ntBASIC17.68■□□□□ 0.42
CTNND1O60716 RN7SL11P-201ENST00000471305 293 ntBASIC17.68■□□□□ 0.42
CTNND1O60716 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNND1O60716 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.68■□□□□ 0.42
CTNND1O60716 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 MIR4783-201ENST00000580343 82 ntBASIC17.68■□□□□ 0.42
CTNND1O60716 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CTNND1O60716 AC009955.4-201ENST00000597192 544 ntBASIC17.68■□□□□ 0.42
CTNND1O60716 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.68■□□□□ 0.42
CTNND1O60716 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CTNND1O60716 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNND1O60716 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNND1O60716 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNND1O60716 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CTNND1O60716 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNND1O60716 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CTNND1O60716 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CTNND1O60716 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.67■□□□□ 0.42
CTNND1O60716 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNND1O60716 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.67■□□□□ 0.42
CTNND1O60716 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNND1O60716 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNND1O60716 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNND1O60716 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.67■□□□□ 0.42
CTNND1O60716 AC138696.2-201ENST00000607376 223 ntBASIC17.67■□□□□ 0.42
CTNND1O60716 AC068587.8-201ENST00000641239 219 ntBASIC17.67■□□□□ 0.42
CTNND1O60716 CICP11-201ENST00000434745 2827 ntBASIC17.67■□□□□ 0.42
CTNND1O60716 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTNND1O60716 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.67■□□□□ 0.42
CTNND1O60716 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNND1O60716 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNND1O60716 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 AL137783.1-201ENST00000623494 1896 ntBASIC17.67■□□□□ 0.42
CTNND1O60716 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNND1O60716 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTNND1O60716 AC008132.1-202ENST00000342005 1389 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNND1O60716 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CTNND1O60716 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.66■□□□□ 0.42
CTNND1O60716 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.66■□□□□ 0.42
CTNND1O60716 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTNND1O60716 HINT2P1-201ENST00000419438 481 ntBASIC17.66■□□□□ 0.42
CTNND1O60716 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.66■□□□□ 0.42
CTNND1O60716 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms