Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 LINC00554-201ENST00000564841 3011 ntBASIC13.66□□□□□ -0.22
ZIC3O60481 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 CLUHP2-201ENST00000426660 1303 ntBASIC13.66□□□□□ -0.22
ZIC3O60481 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ZIC3O60481 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC3O60481 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC3O60481 MESTP3-201ENST00000503460 968 ntBASIC13.66□□□□□ -0.22
ZIC3O60481 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC3O60481 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.66□□□□□ -0.22
ZIC3O60481 MIR6752-201ENST00000618442 71 ntBASIC13.66□□□□□ -0.22
ZIC3O60481 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 FLJ16779-201ENST00000612722 7638 ntBASIC13.66□□□□□ -0.22
ZIC3O60481 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.66□□□□□ -0.22
ZIC3O60481 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ZIC3O60481 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZIC3O60481 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC3O60481 AHCYP2-201ENST00000430630 1300 ntBASIC13.65□□□□□ -0.22
ZIC3O60481 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC3O60481 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZIC3O60481 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
ZIC3O60481 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 MIR1202-201ENST00000408529 83 ntBASIC13.65□□□□□ -0.22
ZIC3O60481 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.65□□□□□ -0.22
ZIC3O60481 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 RPS2P32-201ENST00000439199 892 ntBASIC13.65□□□□□ -0.22
ZIC3O60481 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.65□□□□□ -0.22
ZIC3O60481 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC3O60481 BNIP3P42-201ENST00000454982 569 ntBASIC13.65□□□□□ -0.22
ZIC3O60481 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ZIC3O60481 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC3O60481 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.65□□□□□ -0.22
ZIC3O60481 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
ZIC3O60481 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.65□□□□□ -0.22
ZIC3O60481 BNIP3P29-201ENST00000598302 571 ntBASIC13.65□□□□□ -0.22
ZIC3O60481 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC3O60481 AC011447.5-201ENST00000616168 564 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms