Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNRC18O15417 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNRC18O15417 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNRC18O15417 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC15.86■□□□□ 0.13
TNRC18O15417 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.86■□□□□ 0.13
TNRC18O15417 RN7SL767P-201ENST00000493013 295 ntBASIC15.86■□□□□ 0.13
TNRC18O15417 AL450346.2-201ENST00000495602 1024 ntBASIC15.86■□□□□ 0.13
TNRC18O15417 ABCD1P3-201ENST00000562927 605 ntBASIC15.86■□□□□ 0.13
TNRC18O15417 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC15.86■□□□□ 0.13
TNRC18O15417 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.86■□□□□ 0.13
TNRC18O15417 SLC25A24-204ENST00000569674 2357 ntBASIC15.86■□□□□ 0.13
TNRC18O15417 AC019109.1-201ENST00000401725 1874 ntBASIC15.86■□□□□ 0.13
TNRC18O15417 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNRC18O15417 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNRC18O15417 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNRC18O15417 AL590440.2-201ENST00000641973 1595 ntBASIC15.86■□□□□ 0.13
TNRC18O15417 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNRC18O15417 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNRC18O15417 AC000078.1-201ENST00000420617 682 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 AL021707.6-201ENST00000609212 491 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TNRC18O15417 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNRC18O15417 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNRC18O15417 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNRC18O15417 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 AC104117.4-201ENST00000521486 847 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 KRT8P34-201ENST00000577607 1044 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 BX322562.1-201ENST00000617004 561 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 AC022532.1-201ENST00000624563 1728 ntBASIC15.85■□□□□ 0.13
TNRC18O15417 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TNRC18O15417 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 TEKT4P2-202ENST00000559466 1312 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.84■□□□□ 0.13
TNRC18O15417 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC15.84■□□□□ 0.13
TNRC18O15417 MIR6165-201ENST00000614803 84 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.84■□□□□ 0.13
TNRC18O15417 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TNRC18O15417 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.84■□□□□ 0.13
TNRC18O15417 CRIP1P2-201ENST00000425396 228 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 OR52X1P-201ENST00000446117 914 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC15.84■□□□□ 0.13
TNRC18O15417 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 RPL18AP16-201ENST00000424057 531 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TNRC18O15417 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.84■□□□□ 0.13
TNRC18O15417 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.84■□□□□ 0.13
TNRC18O15417 AP003170.2-201ENST00000544730 786 ntBASIC15.84■□□□□ 0.13
TNRC18O15417 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC15.84■□□□□ 0.13
TNRC18O15417 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC15.84■□□□□ 0.13
TNRC18O15417 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.84■□□□□ 0.13
TNRC18O15417 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.83■□□□□ 0.13
TNRC18O15417 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNRC18O15417 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNRC18O15417 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNRC18O15417 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNRC18O15417 AL513523.2-202ENST00000427283 2040 ntBASIC15.83■□□□□ 0.12
TNRC18O15417 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
TNRC18O15417 RN7SL838P-201ENST00000481676 295 ntBASIC15.83■□□□□ 0.12
TNRC18O15417 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.83■□□□□ 0.12
TNRC18O15417 MIR5193-201ENST00000584510 109 ntBASIC15.83■□□□□ 0.12
TNRC18O15417 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC15.83■□□□□ 0.12
TNRC18O15417 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC15.83■□□□□ 0.12
TNRC18O15417 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 ALOX12P2-203ENST00000570921 1945 ntBASIC15.83■□□□□ 0.12
TNRC18O15417 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TNRC18O15417 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TNRC18O15417 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.83■□□□□ 0.12
TNRC18O15417 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 OR7E12P-201ENST00000344740 973 ntBASIC15.83■□□□□ 0.12
TNRC18O15417 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNRC18O15417 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.83■□□□□ 0.12
TNRC18O15417 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms