Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AP005019.2-201ENST00000615104 511 ntBASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 BX539320.1-201ENST00000623759 877 ntBASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AL162727.3-201ENST00000635661 2787 ntBASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 AC073347.1-201ENST00000421633 2643 ntBASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPA3F8WFD2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 AC079316.1-201ENST00000548397 411 ntBASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 MIR4538-201ENST00000581377 78 ntBASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 AC022532.1-201ENST00000624563 1728 ntBASIC13.9□□□□□ -0.18
NPIPA3F8WFD2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPA3F8WFD2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPA3F8WFD2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPA3F8WFD2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms