Protein–RNA interactions for Protein: Q9NQC7

CYLD, Ubiquitin carboxyl-terminal hydrolase CYLD, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYLDQ9NQC7 AL512343.1-201ENST00000605837 169 ntBASIC16.14■□□□□ 0.17
CYLDQ9NQC7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 AP005019.2-201ENST00000615104 511 ntBASIC16.14■□□□□ 0.17
CYLDQ9NQC7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 AL603764.1-201ENST00000636452 321 ntBASIC16.14■□□□□ 0.17
CYLDQ9NQC7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 AL158070.2-201ENST00000623713 1621 ntBASIC16.14■□□□□ 0.17
CYLDQ9NQC7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CYLDQ9NQC7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 KRT43P-201ENST00000434019 910 ntBASIC16.13■□□□□ 0.17
CYLDQ9NQC7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 AL359881.2-201ENST00000602973 570 ntBASIC16.13■□□□□ 0.17
CYLDQ9NQC7 AL022328.1-201ENST00000610050 478 ntBASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 AC026748.1-201ENST00000624349 3251 ntBASIC16.13■□□□□ 0.17
CYLDQ9NQC7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 AP000845.1-201ENST00000581677 2131 ntBASIC16.13■□□□□ 0.17
CYLDQ9NQC7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 TCAF2P1-201ENST00000291129 2421 ntBASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
CYLDQ9NQC7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 AC007292.2-201ENST00000593524 1812 ntBASIC16.12■□□□□ 0.17
CYLDQ9NQC7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 BOLA2P3-201ENST00000404566 256 ntBASIC16.12■□□□□ 0.17
CYLDQ9NQC7 AL139094.1-201ENST00000405549 1188 ntBASIC16.12■□□□□ 0.17
CYLDQ9NQC7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 AC017083.2-201ENST00000608069 979 ntBASIC16.12■□□□□ 0.17
CYLDQ9NQC7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYLDQ9NQC7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms