Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 NUS1P3-201ENST00000423502 862 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC245100.3-201ENST00000441281 285 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 Z93015.1-201ENST00000451718 390 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC084346.2-201ENST00000607097 949 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 TSPY26P-202ENST00000565928 3884 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 GOLGA2P4-201ENST00000441462 777 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 MIR3615-201ENST00000581999 87 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 PRSS30P-206ENST00000641773 873 ntBASIC18.42■□□□□ 0.54
RPAP1Q9BWH6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AP000845.1-201ENST00000581677 2131 ntBASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AC013726.1-201ENST00000563747 2285 ntBASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 REXO1L4P-201ENST00000605109 1937 ntBASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 SAMD11P1-201ENST00000571429 661 ntBASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AC091271.1-201ENST00000611877 1162 ntBASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AC145423.3-201ENST00000615987 467 ntBASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RPAP1Q9BWH6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RPAP1Q9BWH6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms