Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 RBM4-207ENST00000506523 654 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC19.56■□□□□ 0.72
ABCA3Q99758 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCA3Q99758 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 AL139339.2-201ENST00000608063 657 ntBASIC19.56■□□□□ 0.72
ABCA3Q99758 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ABCA3Q99758 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.56■□□□□ 0.72
ABCA3Q99758 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCA3Q99758 AC009093.10-201ENST00000641956 1442 ntBASIC19.56■□□□□ 0.72
ABCA3Q99758 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.55■□□□□ 0.72
ABCA3Q99758 AD000864.1-201ENST00000624076 2295 ntBASIC19.55■□□□□ 0.72
ABCA3Q99758 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ABCA3Q99758 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ABCA3Q99758 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ABCA3Q99758 UROS-201ENST00000368774 744 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.55■□□□□ 0.72
ABCA3Q99758 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC19.55■□□□□ 0.72
ABCA3Q99758 RPL18AP8-201ENST00000486071 528 ntBASIC19.55■□□□□ 0.72
ABCA3Q99758 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ABCA3Q99758 OR5BD1P-201ENST00000532527 817 ntBASIC19.55■□□□□ 0.72
ABCA3Q99758 AC018695.6-201ENST00000614011 534 ntBASIC19.55■□□□□ 0.72
ABCA3Q99758 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.55■□□□□ 0.72
ABCA3Q99758 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.55■□□□□ 0.72
ABCA3Q99758 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCA3Q99758 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ABCA3Q99758 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCA3Q99758 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
ABCA3Q99758 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.54■□□□□ 0.72
ABCA3Q99758 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
ABCA3Q99758 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
ABCA3Q99758 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.54■□□□□ 0.72
ABCA3Q99758 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.54■□□□□ 0.72
ABCA3Q99758 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.54■□□□□ 0.72
ABCA3Q99758 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.54■□□□□ 0.72
ABCA3Q99758 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC19.54■□□□□ 0.72
ABCA3Q99758 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC19.54■□□□□ 0.72
ABCA3Q99758 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 FAM86B3P-203ENST00000523992 854 ntBASIC19.54■□□□□ 0.72
ABCA3Q99758 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ABCA3Q99758 AC010632.2-201ENST00000588369 1224 ntBASIC19.54■□□□□ 0.72
ABCA3Q99758 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC19.54■□□□□ 0.72
ABCA3Q99758 AC006483.2-201ENST00000609813 515 ntBASIC19.54■□□□□ 0.72
ABCA3Q99758 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.53■□□□□ 0.72
ABCA3Q99758 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.53■□□□□ 0.72
ABCA3Q99758 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ABCA3Q99758 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms