Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPRD1AQ96P16 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 HLA-K-203ENST00000430151 1046 ntBASIC15.71■□□□□ 0.11
RPRD1AQ96P16 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 IGHV3-71-201ENST00000523324 359 ntBASIC15.71■□□□□ 0.11
RPRD1AQ96P16 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 WASH3P-207ENST00000560956 1394 ntBASIC15.71■□□□□ 0.11
RPRD1AQ96P16 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.71■□□□□ 0.11
RPRD1AQ96P16 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RPRD1AQ96P16 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AC091951.1-201ENST00000512854 2465 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 LINC00554-201ENST00000564841 3011 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ARSEP1-201ENST00000420443 635 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AC016694.1-201ENST00000434179 700 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AC007551.1-201ENST00000457394 519 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AC022616.1-201ENST00000518688 554 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 GNRHR2-203ENST00000581100 1187 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AC017083.2-201ENST00000608069 979 ntBASIC15.7■□□□□ 0.1
RPRD1AQ96P16 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RPRD1AQ96P16 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms